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Gene name
Human disease related genes
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UMAP gene cluster
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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409 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ACHE
ENSSSCG00000030303
ENSG00000087085
Acetylcholinesterase (Cartwright blood group)
Tissue enriched
Detected in many
brain:
39.3
ADAM22
ENSSSCG00000015297
ENSG00000008277
ADAM metallopeptidase domain 22
Tissue enriched
Detected in many
brain:
51.4
ADCY5
ENSSSCG00000027952
ENSG00000173175
Adenylate cyclase 5
Tissue enriched
Detected in many
brain:
73.5
ADCYAP1
ENSSSCG00000035186
ENSG00000141433
Pituitary adenylate cyclase-activating polypeptide precursor
Tissue enriched
Detected in some
brain:
22.4
ADGRB2
ENSSSCG00000003604
ENSG00000121753
Adhesion G protein-coupled receptor B2
Tissue enriched
Detected in many
brain:
31.1
ADORA2A
ENSSSCG00000010054
ENSG00000128271
Adenosine A2a receptor
Tissue enriched
Detected in many
brain:
67.0
AGAP2
ENSSSCG00000038732
ENSG00000135439
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
Tissue enriched
Detected in many
brain:
57.7
AGPAT4
ENSSSCG00000004033
ENSG00000026652
1-acyl-sn-glycerol-3-phosphate acyltransferase delta
Tissue enriched
Detected in many
brain:
52.4
AJAP1
ENSSSCG00000031344
ENSG00000196581
Adherens junctions associated protein 1
Tissue enriched
Detected in some
brain:
19.8
AK5
ENSSSCG00000003773
ENSG00000154027
Adenylate kinase 5
Tissue enriched
Detected in many
brain:
71.0
AKAP5
ENSSSCG00000002268
ENSG00000179841
A-kinase anchoring protein 5
Tissue enriched
Detected in many
brain:
44.5
ANKRD34C
ENSSSCG00000032430
ENSG00000235711
Ankyrin repeat domain 34C
Tissue enriched
Detected in some
brain:
22.2
ANLN
ENSSSCG00000016658
ENSG00000011426
Anillin actin binding protein
Tissue enriched
Detected in many
brain:
111.4
ARHGDIG
ENSSSCG00000038979
ENSG00000242173
Rho GDP dissociation inhibitor gamma
Tissue enriched
Detected in some
brain:
41.6
ARHGEF33
ENSSSCG00000040621
ENSG00000214694
Rho guanine nucleotide exchange factor 33
Tissue enriched
Detected in many
brain:
33.5
AVP
ENSSSCG00000007163
ENSG00000101200
Vasopressin-neurophysin 2-copeptin precursor
Tissue enriched
Detected in some
brain:
151.7
BARHL1
ENSSSCG00000005730
ENSG00000125492
BarH like homeobox 1
Tissue enriched
Detected in single
brain:
17.2
BARHL2
ENSSSCG00000006914
ENSG00000143032
BarH like homeobox 2
Tissue enriched
Detected in some
brain:
33.7
BCAN
ENSSSCG00000006477
ENSG00000132692
Brevican
Tissue enriched
Detected in some
brain:
38.1
BEGAIN
ENSSSCG00000036589
ENSG00000183092
Brain enriched guanylate kinase associated
Tissue enriched
Detected in some
brain:
27.2
BRINP1
ENSSSCG00000005504
ENSG00000078725
BMP/retinoic acid-inducible neural-specific protein 1 precursor
Tissue enriched
Detected in many
brain:
39.1
BSN
ENSSSCG00000011384
ENSG00000164061
Bassoon presynaptic cytomatrix protein
Tissue enriched
Detected in many
brain:
35.8
BTBD17
ENSSSCG00000026789
ENSG00000204347
BTB domain containing 17
Tissue enriched
Detected in some
brain:
24.9
C11orf87
ENSSSCG00000036943
ENSG00000185742
Chromosome 11 open reading frame 87
Tissue enriched
Detected in some
brain:
39.4
C1QL3
ENSSSCG00000011043
ENSG00000165985
Complement C1q like 3
Tissue enriched
Detected in many
brain:
39.1
C2CD4C
ENSSSCG00000037177
ENSG00000183186
C2 calcium dependent domain containing 4C
Tissue enriched
Detected in some
brain:
11.4
CABP1
ENSSSCG00000009913
ENSG00000157782
Calcium binding protein 1
Tissue enriched
Detected in some
brain:
58.6
CABP7
ENSSSCG00000025869
ENSG00000100314
Calcium binding protein 7
Tissue enriched
Detected in some
brain:
38.9
CACNB3
ENSSSCG00000032967
ENSG00000167535
Calcium voltage-gated channel auxiliary subunit beta 3
Tissue enriched
Detected in many
brain:
23.0
CACNB4
ENSSSCG00000029073
ENSG00000182389
Voltage-dependent L-type calcium channel subunit beta-4
Tissue enriched
Detected in many
brain:
64.8
CACNG4
ENSSSCG00000037202
ENSG00000075461
Calcium voltage-gated channel auxiliary subunit gamma 4
Tissue enriched
Detected in some
brain:
62.5
CACNG8
ENSSSCG00000003255
ENSG00000142408
Calcium voltage-gated channel auxiliary subunit gamma 8
Tissue enriched
Detected in some
brain:
48.4
CALCR
ENSSSCG00000015320
ENSG00000004948
Calcitonin receptor
Tissue enriched
Detected in some
brain:
81.1
CAMK2A
ENSSSCG00000014443
ENSG00000070808
Calcium/calmodulin dependent protein kinase II alpha
Tissue enriched
Detected in some
brain:
130.1
CAMK2N1
ENSSSCG00000024009
ENSG00000162545
Calcium/calmodulin dependent protein kinase II inhibitor 1
Tissue enriched
Detected in many
brain:
117.1
CAMKV
ENSSSCG00000025416
ENSG00000164076
CaM kinase like vesicle associated
Tissue enriched
Detected in some
brain:
59.1
CBLN1
ENSSSCG00000040652
ENSG00000102924
Cerebellin-1 precursor
Tissue enriched
Detected in some
brain:
84.6
CBLN2
ENSSSCG00000020859
ENSG00000141668
Cerebellin-2
Tissue enriched
Detected in some
brain:
26.0
CBLN3
ENSSSCG00000001985
ENSG00000139899
Cerebellin-3 precursor
Tissue enriched
Detected in some
brain:
118.2
CBLN4
ENSSSCG00000007490
ENSG00000054803
Cerebellin-4 precursor
Tissue enriched
Detected in single
brain:
13.6
CDH20
ENSSSCG00000004903
ENSG00000101542
Cadherin 20
Tissue enriched
Detected in some
brain:
22.9
CDH22
ENSSSCG00000007439
ENSG00000149654
Cadherin 22
Tissue enriched
Detected in some
brain:
17.8
CDK5R2
ENSSSCG00000021584
ENSG00000171450
Cyclin dependent kinase 5 regulatory subunit 2
Tissue enriched
Detected in some
brain:
49.8
CHRM5
ENSSSCG00000036662
ENSG00000184984
Cholinergic receptor muscarinic 5
Tissue enriched
Detected in some
brain:
18.9
CHRNA5
ENSSSCG00000001751
ENSG00000169684
Cholinergic receptor nicotinic alpha 5 subunit
Tissue enriched
Detected in some
brain:
10.2
CLDN11
ENSSSCG00000011747
ENSG00000013297,ENSG00000285218
Claudin-11
Tissue enriched
Detected in some
brain:
149.9
CNR1
ENSSSCG00000004309
ENSG00000118432
Cannabinoid receptor 1
Tissue enriched
Detected in some
brain:
49.8
CNTN2
ENSSSCG00000040824
ENSG00000184144
Contactin 2
Tissue enriched
Detected in some
brain:
54.9
CNTN6
ENSSSCG00000038152
ENSG00000134115
Contactin 6
Tissue enriched
Detected in some
brain:
15.8
CPLX2
ENSSSCG00000033682
ENSG00000145920
Complexin 2
Tissue enriched
Detected in some
brain:
95.7
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